Metexplore:
MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks. (2010) Ludovic Cottret, David Wildridge, Florence Vinson, Michael P. Barrett, Huber Charles, Marie-France Sagot et Fabien Jourdan. (2010) Nucleic Acids Research. 38 (suppl2): W132-W137.
Applications:
Liver cells and Trypanosoma brucei metabolism:
Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining. (2009) Fabien Jourdan, Ludovic Cottret, David Wildridge, Richard Scheltema, Anne Hillenweck, Michael P. Barrett, Daniel Zalko, David G. Watson and Laurent Debrauwer. Metabolomics, 6(2):312-321.
Algorithms:
Gap filler:
Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining. (2009) Fabien Jourdan, Ludovic Cottret, David Wildridge, Richard Scheltema, Anne Hillenweck, Michael P. Barrett, Daniel Zalko, David G. Watson and Laurent Debrauwer. Metabolomics, 6(2):312-321.
Scope:
Expanding metabolic networks: scopes of compounds, robustness, and evolution. (2005) Handorf, T. Ebenhöh, O. & Heinrich, R.J Mol Evol 61(4), 498-
512.
Choke Points:
Computational analysis of Plasmodium falciparum metabolism: organizing genomic information to facilitate drug discovery. (2004) Yeh, I. Hanekamp, T. Tsoka, S. Karp, P. D. & Altman, R. B. Genome Res 14(5), 917-924.